Interactive browser-based tool for visualising data across space, time, and categories using maps, timelines, charts, and genetic trees.
Features
EpiGenTracker turns tabular data (.csv) into an interactive mapātimelineāchart visualisation. Load yourĀ sample .csv, play through time, compareĀ two regions, and (optionally) explore aĀ genetic similarity tree.
- Map:Ā plots samples by administrative region.
- Timeline player:Ā animate sample appearances by collection date.
- Charts:Ā compare two regions (Area A/B) over time, grouped and coloured by assigned labels.
- Genetic Tree (optional):Ā visualize pairwise similarity from aĀ
.tabĀ distance matrix. - No backend needed:Ā works entirely offline in your browser.
App version: Functional Prototype š£ v0.6
Quick Start
- Load Map:Ā ClickĀ Load eastern GMS map (KH, LA, TH, VN)Ā orĀ upload your own GeoJSON layers (ADM0āADM2)
- Load Sample Data (.csv)Ā ā the map animates over time.
- š Explore Data! ā Aggregate temporal trend by region, zoom in and out, track specific labels.
- (Optional)Ā LoadĀ Genetic Distance (.tab)Ā to enable the similarity tree.
How to prepare your own data
Map.geojson / Sample.csv / Distance.tab
ā”ļø See Instructions on GitHub
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