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Website developed and maintained by Varanya Wasakul.

Data

πŸ‘‹πŸ½ Welcome to our Data Hub!

Here you'll find resources about the Genetic Report Card (GRC) releases, access to open datasets, and guides for data interpretation.

Table of Contents

  • Visual summary the latest data release
  • Genetic Report Card (GRC)
  • GenRe-Mekong P. falciparum data
  • P. falciparum Community Project
  • Data available on GitHub
  • Guides to the GRC
  • Transforming your data into GRC format
  • WHO Malaria Threat Maps
  • πŸ“„ Data Release Policy
Please refer to theΒ terms of useΒ when accessing GenRe-Mekong data.

Visual summary the latest data release

ℹ️ How to use this interactive data explorer

Genetic Report Card (GRC)

GenRe-Mekong routinely releases reports and genotype data in a form of Genetic Report Cards (GRC) to our partner studies. Additionally, we periodically release public access datasets alongside peer-reviewed publication, which is shared on this site as well as on MalariaGEN

The GRC dataset can be used with the grcMalaria visualisation and mapping tool.

Below is Open access data

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If you use GenRe-Mekong Data in publications, please cite one of these manuscripts:
πŸ“„

Jacob, C. G. et al. Genetic surveillance in the Greater Mekong Subregion and South Asia to support malaria control and elimination. eLife (2021). https://doi.org:10.1101/2020.07.23.20159624

πŸ“„

Wasakul, V. et al. Genetic surveillance of Plasmodium falciparum populations following treatment policy revisions in the Greater Mekong Subregion. Nature Communications 16, 4689 (2025). https://doi.org:10.1038/s41467-025-59946-1

GenRe-Mekong P. falciparum data

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Click on the Release Date to view and download data:
Release Date
Details
Period
GRC Version
Download
Cite
Compatible
GRC 07-July-2022

13,078 samples | 8 countries

2012 - 2021

v1.2

GitHub

Papers

grcMalaria v1.0.0
GRC 14-May-2024

13,647 samples | 8 countries

2012 - 2022

v1.4

GitHub

Paper

grcMalaria v2.0.0

P. falciparum Community Project

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Click on the Release Date to view and download data:
Release Date
Details
Period cover
GRC Version
Download on
Cite
Compatible
Pf7 03-Nov-2023

16,203 QC pass samples from the MalariaGEN Pf7 global data resource | 33 countries

1984 - 2018

v1.4

GitHub

Paper

grcMalaria v2.0.0

Data available on GitHub

πŸ’» GitHub - GenRe-Mekong/Data: Genetic Report Card dataset

Guides to the GRC

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A guide to GRC data interpretation, and explanation about the link between the genotyped mutations and the predicted resistance to antimalarial drugs.

πŸ“’ GRC User Guide (GenRe-Mekong GRC V1.4 format)

πŸ“’ GRC User Guide (GenRe-Mekong GRC V1.2 format)

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The GenRe-Mekong genetic surveillance is conducted using SpotMalaria’s standardized operating procedure and genotyping platform. SpotMalaria provides data for a wide range of genetic markers and features of the malaria parasites in each sample, and predict their level of resistance to various antimalarials.

🟠 SpotMalaria Homepage

βš™οΈ SpotMalaria platform - Technical Notes and Methods

πŸ’Š Drug Resistance Prediction Rules applied to the GRC

Transforming your data into GRC format

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The grcMalaria package processes standardised genetic surveillance data in the form of a GRC data file, a Microsoft Excel spreadsheet formatted according to the GenRe-Mekong GRC Data Dictionary.

(🚧 Coming soon!)

WHO Malaria Threat Maps

GenRe-Mekong periodically release public datasets to WHO malaria threat maps

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πŸ“„ Data Release Policy

Read ourΒ terms of useΒ when accessing GenRe-Mekong data

ℹ️How to use this interactive data explorerUsing GenRe-Mekong DataUsing GenRe-Mekong Data