Tools

To facilitate translation of these data into actionable information for public health, we developed the grcMalaria R package, which specifically takes information from SpotMalaria’s Genetic Report Cards (GRC) to produce intuitive geographical map of prevalence, diversity and relatedness. This software library is also capable of identifying circulating strains, characterizing their drug resistance profile, and mapping their spread.

A guide to the grcMalaria R package

📖 grcMalaria R package User Guide

Don’t know how to start?

Watch installation guide:

📺 Installation to R and grcMalaria R package

Watch tutorials on the grcMalaria R package (Module 2):

📺 Tutorials to 4 essential functions (sample count map, resistance prevalence map, allele proportion map and cluster prevalence)

grcMalaria R package Github page

🔵 grcMalaria github page